Sexually transmitted infections
Infection may be asymptomatic. Overlaps with STD, which refers to disease manifestations.
Cases: Data not available
Infection Case Intelligence
Determinants of diseases · source terminology from the additional requirements
Data not available
The two antibiograms report microbiology isolates, not unique patients or infection episodes. No infection case counts, diagnoses, demographics, risk factors, genomic findings or length of stay are supplied.
Urinary tract infections
Urinary tract infection episodes require clinical diagnoses, not just positive urine isolates.
Cases: Data not available
Upper respiratory tract infections
Includes bacterial and viral infections; an antibiogram cannot enumerate these episodes.
Cases: Data not available
Sexually transmitted diseases
Source terminology retained separately from STI. Symptomatic disease and infection overlap; avoid double-counting.
Cases: Data not available
Gastrointestinal infections
Gastrointestinal system category; requires validated infection diagnoses and specimen linkage.
Cases: Data not available
Cardiovascular system
System abbreviation, not a specific infection diagnosis; case inclusion criteria require source confirmation.
Cases: Data not available
Neuromusculoskeletal system
Provisional expansion of source abbreviation; confirm the intended definition against the original Slide 11.
Cases: Data not available
Required future clinical sources
| Required field | Current status | Required source |
|---|---|---|
| Case counts, year, category | Data not available | Clinical diagnosis registry / EHR; unique episode definitions and deduplication |
| Clinical department, geographic location | Data not available | Encounter and facility registry linked to each diagnosed episode |
| Associated bacterial pathogens | Data not available | LIS culture results linked to diagnosed clinical episodes |
| Demographics and risk factors | Data not available | De-identified clinical records and a documented risk-factor dictionary |
| Clinical resistance patterns | Data not available | Patient-linked AST results, testing methods and breakpoint versions |
| Genomic resistance patterns | Data not available | Sequencing/genomics service with confirmed specimen-to-episode linkage |
| Length of stay | Data not available | Admission/discharge records linked to an infection episode |
Original Slide 11 is not available in this upload set. Categories are retained exactly from your supplement. NMSK expansion and case definitions require confirmation; STI and STDs must not be summed as distinct populations.
View isolate-based antibiograms